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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53738864_53740681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53738864 - 53740681

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCCC

5'SS Class:

major

3'SS Sequence:

TTGTTTCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTAATTTTAAAT

Flanking Amino Acid:

GRAELQASDHRPVLAIVEVE

Intron Amino Acid Position:

799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.8

40.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.8

0.63

0.9

73.9

35.9

Minor 5ss

31.4

-2.1

3.3

42.6

44.4

Minor BPS

0.55

1.4

78.52

37.3

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035800

53697778 - 53753902

56125

ENSAPLT00000017388

53690370 - 53753970

63601

ENSAPLT00000002654

53700236 - 53753902

53667