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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53747905_53748650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53747905 - 53748650

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

ATTATTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

KLLPGAPQQPPKVRTGISKP

Intron Amino Acid Position:

1089

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

62.7

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.8

0.56

1.1

75.1

38.2

Minor 5ss

35.5

-1.6

3.2

49.8

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017388

53690370 - 53753970

63601

ENSAPLT00000002654

53700236 - 53753902

53667

ENSAPLT00000035800

53697778 - 53753902

56125