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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53766250_53769146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53766250 - 53769146

Intron Length:

2897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTAGTTAACC

Flanking Amino Acid:

ERLHSSIVRAGWVSVLAEVM

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.2

0.59

0.9

71.6

33.9

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

56.2

0.17

2.2

71.32

39.3

Associated Gene:

Gene:

SERAC1

Ensembl Gene ID:

ENSAPLG00000002831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002884

53758950 - 53774156

15207