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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53898811_53915706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53898811 - 53915706

Intron Length:

16896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

TGACCTTTGACG

Flanking Amino Acid:

CGIWTPDDQQVLFGTADGQV

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

74.1

0.6

66.7

39.9

Major PPT

80.9

0.69

0.9

77.7

40.6

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

61.6

0.22

1.4

61.73

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719