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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53915888_53918434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53915888 - 53918434

Intron Length:

2547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTCAC

U12 Branch Point Sequence:

TTTTCGCTCACT

Flanking Amino Acid:

TDSDDYSPPQDGPAAYPVPV

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

57.1

0.18

1.3

63.1

44.5

Major PPT

88.7

0.87

0.7

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

49.6

0.05

2.7

84.58

42.1

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719