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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53922500_53932716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53922500 - 53932716

Intron Length:

10217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTCTTCATG

Flanking Amino Acid:

HIYTLETPVQRPIISICWGH

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

81.9

0.72

0.8

77.3

30.2

Minor 5ss

30.8

-2.2

3.7

47.1

48.3

Minor BPS

59.3

0.15

1.8

66.07

42.7

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719