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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53932942_53934580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53932942 - 53934580

Intron Length:

1639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAAGGA

5'SS Class:

major

3'SS Sequence:

TCGTTTAATTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTTCGTTTAATT

Flanking Amino Acid:

LTTAFIPTIKPPIPDPNNMR

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

64.6

35.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

64.7

0.33

1.1

69.2

40.1

Minor 5ss

23.7

-3

3.1

29.7

43.1

Minor BPS

60.3

0.4

1.8

76.64

40.8

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719