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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53935450_53936910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53935450 - 53936910

Intron Length:

1461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCATT

5'SS Class:

strong_major

3'SS Sequence:

GCCTTATATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTGCCTTATAT

Flanking Amino Acid:

SRASKSPKLPRINIEARKSP

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

83.7

34.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.9

0.49

65.8

39.1

Minor 5ss

45.4

-0.5

2.9

66.6

44.4

Minor BPS

61.2

0.43

1.8

79.73

42.1

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719