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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53937056_53938304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53937056 - 53938304

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

TTTTTTTTTGCA

Flanking Amino Acid:

REFPLEDITQHNYLAQVTSN

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

41.4

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

1.1

0.4

13.8

Minor 5ss

44.6

-0.6

3.1

65.1

46.2

Minor BPS

44.6

-0.4

3.5

74.26

38.1

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719