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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53939474_53943496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53939474 - 53943496

Intron Length:

4023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

GTCTTTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAC

U12 Branch Point Sequence:

CATCAGTTGACT

Flanking Amino Acid:

VFSEDEDDLPVPGAPGAPAS

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

64.3

47.1

Major BPS

62.5

0.31

1.1

54.8

42.1

Major PPT

81.6

0.71

0.9

76.2

37.8

Minor 5ss

31.2

-2.1

3.1

31.4

42.5

Minor BPS

46.8

-0.1

2.3

66.65

43.8

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719