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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53946085_53947757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53946085 - 53947757

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGG

5'SS Class:

major

3'SS Sequence:

CCCTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTCCCT

Flanking Amino Acid:

NFQIELEGRQVMQFGRIDGN

Intron Amino Acid Position:

1535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

60.8

44.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.45

0.8

60.7

35.3

Minor 5ss

28.4

-2.5

3.5

46.9

Minor BPS

49.9

0.08

3.7

91.67

38.1

Associated Gene:

Gene:

TULP4

Ensembl Gene ID:

ENSAPLG00000013475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029077

53830048 - 53948874

118827

ENSAPLT00000014041

53830156 - 53948874

118719