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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54008612_54009744_R

Intron Information:

Intron Rank:

129268

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54008612 - 54009744

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

CTTTGTCATGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GCCTTTGTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.16

1.7

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

38.4

-1

2.2

37.87

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022925

54008532 - 54010585

2054