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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54019831_54024800_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54019831 - 54024800

Intron Length:

4970

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAGAATGT

5'SS Class:

weak_major

3'SS Sequence:

AACTTTAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GAAACTTTAAAA

Flanking Amino Acid:

RPQTVVHLSEIKYYVFLLMV

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.3

42.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

61.4

0.26

1.1

56.3

41.8

Minor 5ss

29.7

-2.3

4.4

50.2

46.7

Minor BPS

57.2

0.22

1.4

60.83

38.2

Associated Gene:

Gene:

SYTL3

Ensembl Gene ID:

ENSAPLG00000013171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013736

54016544 - 54043373

26830