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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54028442_54032893_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54028442 - 54032893

Intron Length:

4452

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCTGTTTCA

5'SS Class:

weak_major

3'SS Sequence:

AGTTTCAAGCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

AAATCCTTACCA

Flanking Amino Acid:

VSKLLYTILKEEDITTSPTS

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.4

47.3

42.7

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

49.4

-0

1.2

47.4

43.8

Minor 5ss

24.8

-2.9

3.7

25.3

36.6

Minor BPS

67.2

0.54

1.6

72.24

39.2

Associated Gene:

Gene:

SYTL3

Ensembl Gene ID:

ENSAPLG00000013171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013736

54016544 - 54043373

26830