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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54035043_54037878_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54035043 - 54037878

Intron Length:

2836

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCATCCAAA

5'SS Class:

weak_major

3'SS Sequence:

CTCTATTTACAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

CATTCCATATCC

Flanking Amino Acid:

TNTTYVYLDGGYVKIYLLPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.4

48.6

43.7

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

64.6

0.33

1.1

64.3

40.3

Minor 5ss

39.6

-1.2

3.8

47.7

48.1

Minor BPS

55.6

0.16

1.9

68.65

42.5

Associated Gene:

Gene:

SYTL3

Ensembl Gene ID:

ENSAPLG00000013171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034698

54035002 - 54041460

6459