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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54037982_54039713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54037982 - 54039713

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCTG

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TGCTTTATAAAT

Flanking Amino Acid:

VDPEFDETLKYKIEYSQLAS

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.3

Major BPS

78.6

0.71

78.6

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

33.4

-1.9

3.6

47.4

Minor BPS

0.14

1.7

70.29

40.6

Associated Gene:

Gene:

SYTL3

Ensembl Gene ID:

ENSAPLG00000013171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034698

54035002 - 54041460

6459

ENSAPLT00000013736

54016544 - 54043373

26830