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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54046391_54047221_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
54046391 - 54047221

Intron Length:
831

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTGAGTATC

5'SS Class:
major

3'SS Sequence:
TTTTTTTCCCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TTTTTTTTCCCC

Flanking Amino Acid:
ESEVEEWQIRAREAQEDLVK

Intron Amino Acid Position:
449

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.57
1
75
35.1

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
90.7
0.92
0.6
84.9
29.9

Minor 5ss
36.1
-1.6
2.8
42.3
38.4

Minor BPS
44.1
-0.4
3.6
72.92
38.9

Associated Gene:

Gene:
EZR

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

54045718 - 54080517
34800

54045667 - 54080517
34851