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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54047315_54047611_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
54047315 - 54047611

Intron Length:
297

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGAGCC

5'SS Class:
strong_major

3'SS Sequence:
TATTATTTAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATAAT

U12 Branch Point Sequence:
TATTATTTAACA

Flanking Amino Acid:
IDQIKSQEQLATELAEYTAK

Intron Amino Acid Position:
418

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
0.9
68.7
34.5

Major BPS
87.8
0.94
0.9
86.6
28.1

Major PPT
78.2
0.64
1
73.8
39.9

Minor 5ss
31.8
-2.1
3.3
40.1
39.9

Minor BPS
75.1
0.78
1.4
81.72
32.8

Associated Gene:

Gene:
EZR

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

54045667 - 54080517
34851

54045718 - 54080517
34800