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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54182510_54183339_R

Intron Information:

Intron Rank:

147268

Intron Class:

major

Intron Phase:

Intron Coordinates:

54182510 - 54183339

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TGCTTCCCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

85.1

0.79

0.7

77.5

31.2

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

43.8

-0.4

56.52

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018415

54182299 - 54185029

2731