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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54188286_54189091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54188286 - 54189091

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

GTTCTCCCATCC

Flanking Amino Acid:

EDDTLPQPVQDLLTILYMKG

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

77.9

38.6

Major BPS

59.9

0.25

1.3

70.1

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

39.7

-1.2

3.2

56.4

Minor BPS

43.4

-0.5

57.68

40.5

Associated Gene:

Gene:

TAGAP

Ensembl Gene ID:

ENSAPLG00000006826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007083

54185792 - 54192634

6843