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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54208164_54208701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54208164 - 54208701

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCATCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

GGTCATTTATCT

Flanking Amino Acid:

DVATQIEEGELFDFDIEVEP

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

71.6

38.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

66.8

0.38

0.8

57.2

32.2

Minor 5ss

39.9

-1.1

2.8

52.3

44.5

Minor BPS

49.6

0.05

1.8

68.29

Associated Gene:

Gene:

RSPH3

Ensembl Gene ID:

ENSAPLG00000007212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024583

54205306 - 54217259

11954

ENSAPLT00000007479

54205306 - 54217259

11954