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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54211564_54213858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54211564 - 54213858

Intron Length:

2295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TTCTCTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CGTTCGTTAATG

Flanking Amino Acid:

KKVLGRMMLDSLIRTVVEKR

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

71.7

34.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

85.8

0.81

0.8

84.1

30.9

Minor 5ss

43.4

-0.7

2.8

62.5

42.2

Minor BPS

0.08

2.2

63.65

44.7

Associated Gene:

Gene:

RSPH3

Ensembl Gene ID:

ENSAPLG00000007212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024583

54205306 - 54217259

11954

ENSAPLT00000007479

54205306 - 54217259

11954