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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54241308_54269905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54241308 - 54269905

Intron Length:

28598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

TTACAGTTAAAC

Flanking Amino Acid:

SPGKKSSGEFRISKRILKKA

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

0.99

0.5

92.6

17.2

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

47.1

-0.2

2.3

63.53

41.1

Associated Gene:

Gene:

ZC2HC1B

Ensembl Gene ID:

ENSAPLG00000007379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007646

54241208 - 54274580

33373