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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54267756_54269905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54267756 - 54269905

Intron Length:

2150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTACTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAA

U12 Branch Point Sequence:

ATACAAGTAACA

Flanking Amino Acid:

SPGKKSSGEFRLQMHNRR*

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

65.8

0.39

73.3

31.3

Major PPT

77.4

0.62

0.9

73.7

35.8

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

43.6

-0.4

2.3

58.96

39.7

Associated Gene:

Gene:

ZC2HC1B

Ensembl Gene ID:

ENSAPLG00000007379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032542

54267731 - 54277297

9567