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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54269985_54270699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54269985 - 54270699

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

AAATTATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTACAAAATT

Flanking Amino Acid:

EAASTDKPSPETPHGTLQKP

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.1

0.54

42.9

Minor 5ss

-1.8

3.3

48.8

Minor BPS

0.2

2.1

81.94

39.5

Associated Gene:

Gene:

ZC2HC1B

Ensembl Gene ID:

ENSAPLG00000007379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043362

54260694 - 54274580

13887

ENSAPLT00000032542

54267731 - 54277297

9567

ENSAPLT00000007646

54241208 - 54274580

33373