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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54270806_54271577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54270806 - 54271577

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTCTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAG

U12 Branch Point Sequence:

ACTCTCTTACTA

Flanking Amino Acid:

FAAKTTRQAVGKQPVTQRKK

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

66.8

0.42

1.5

75.7

36.5

Major PPT

69.7

0.44

0.9

63.2

37.6

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

54.5

0.14

1.6

62.27

38.5

Associated Gene:

Gene:

ZC2HC1B

Ensembl Gene ID:

ENSAPLG00000007379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032542

54267731 - 54277297

9567

ENSAPLT00000007646

54241208 - 54274580

33373

ENSAPLT00000043362

54260694 - 54274580

13887