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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54299880_54300012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54299880 - 54300012

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGAATTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

TCCCCTTGAATT

Flanking Amino Acid:

EVHEESRQFTS*

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

78.6

0.64

69.6

45.6

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

58.1

0.33

1.4

69.73

41.8

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008090

54298922 - 54400318

101397