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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54302478_54303589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54302478 - 54303589

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGATG

5'SS Class:

major

3'SS Sequence:

CTCCCGCTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

GTCTTATTAAGT

Flanking Amino Acid:

REIKRRLSRKLSLRPTVAEL

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

71.4

39.9

Major BPS

75.5

0.63

66.3

40.4

Major PPT

75.3

0.57

0.8

67.6

32.4

Minor 5ss

30.5

-2.2

3.2

39.3

46.2

Minor BPS

54.9

0.23

1.9

73.22

43.6

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031798

54298922 - 54370243

71322

ENSAPLT00000038921

54298922 - 54370243

71322

ENSAPLT00000008090

54298922 - 54400318

101397

ENSAPLT00000036709

54298922 - 54407766

108845

ENSAPLT00000036586

54298922 - 54355972

57051

ENSAPLT00000035843

54298922 - 54370243

71322