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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54316003_54329855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54316003 - 54329855

Intron Length:

13853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATTT

Flanking Amino Acid:

ALEGKKEDQKASSSSSHAKK

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.5

0.82

0.7

26.8

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

68.8

0.67

1.6

82.89

39.2

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036709

54298922 - 54407766

108845

ENSAPLT00000035843

54298922 - 54370243

71322