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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54319905_54329855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54319905 - 54329855

Intron Length:

9951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ACTTTCTTATCC

Flanking Amino Acid:

ALEGKKEDQKESTTDHCPEI

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.5

0.62

0.8

73.3

30.6

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

65.9

0.48

1.6

72.01

39.4

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038921

54298922 - 54370243

71322

ENSAPLT00000036586

54298922 - 54355972

57051

ENSAPLT00000031798

54298922 - 54370243

71322

ENSAPLT00000008090

54298922 - 54400318

101397