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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54325827_54329855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54325827 - 54329855

Intron Length:

4029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTTGCTTTATTT

Flanking Amino Acid:

ALEGKKEDQKGSYTEVFQQT

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

0.52

1.5

79.6

35.6

Major PPT

85.6

0.8

77.2

37.1

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

65.7

0.57

1.7

83.14

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045219

54325154 - 54370243

45090