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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54330015_54343860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54330015 - 54343860

Intron Length:

13846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCACG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGCTTTTTAATT

Flanking Amino Acid:

TSDKFRETSADGDVTVNFET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

42.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.4

0.8

82.7

32.9

Minor 5ss

45.8

-0.4

2.5

58.1

46.3

Minor BPS

66.2

0.59

1.2

72.44

39.2

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036586

54298922 - 54355972

57051

ENSAPLT00000031798

54298922 - 54370243

71322