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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54344029_54355971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

54344029 - 54355971

Intron Length:

11943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTCAGTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

45.7

-0.2

2.4

70.09

46.4

Associated Gene:

Gene:

PHACTR2

Ensembl Gene ID:

ENSAPLG00000007779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036586

54298922 - 54355972

57051