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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54433411_54434938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54433411 - 54434938

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTCTTACCT

Flanking Amino Acid:

YVVLTSKHHEGFTLWGSKYS

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.1

0.88

0.7

84.5

29.9

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

73.2

0.81

1.6

86.99

39.2

Associated Gene:

Gene:

FUCA2

Ensembl Gene ID:

ENSAPLG00000008382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008718

54430591 - 54440681

10091