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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54438239_54438971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54438239 - 54438971

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAAAT

U12 Branch Point Sequence:

TGTTCCCCATTT

Flanking Amino Acid:

AQNDTVTPDVWYTFRPTEGK

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

40.6

Major BPS

54.8

0.12

1.3

62.7

40.5

Major PPT

70.7

0.47

0.9

65.9

34.5

Minor 5ss

31.2

-2.2

3.2

36.8

41.4

Minor BPS

48.6

-0

2.1

74.08

42.6

Associated Gene:

Gene:

FUCA2

Ensembl Gene ID:

ENSAPLG00000008382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008718

54430591 - 54440681

10091