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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54439081_54440512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54439081 - 54440512

Intron Length:

1432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTGTTCTAATT

Flanking Amino Acid:

EPQAKLGETQVKLVGYKEPL

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.8

0.69

0.9

77.6

35.4

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

54.2

0.21

1.7

73.99

37.6

Associated Gene:

Gene:

FUCA2

Ensembl Gene ID:

ENSAPLG00000008382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008718

54430591 - 54440681

10091