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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54440746_54443000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54440746 - 54443000

Intron Length:

2255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAA

Flanking Amino Acid:

CSETPSHFVQVVKQIGIKQC

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.1

0.68

31.5

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

62.5

0.39

1.6

75.81

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035146

54440296 - 54461782

21487

ENSAPLT00000008876

54433882 - 54461782

27901