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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54446754_54448455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54446754 - 54448455

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTTTTCCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGTCACAGAACT

Flanking Amino Acid:

DNAAVCKNGTTPLAPPEVQQ

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

76.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.9

0.81

0.7

24.3

Minor 5ss

-0.3

2.8

67.3

37.5

Minor BPS

49.2

0.02

1.9

74.18

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023413

54441763 - 54461782

20020

ENSAPLT00000008876

54433882 - 54461782

27901

ENSAPLT00000035146

54440296 - 54461782

21487