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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54455906_54461709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54455906 - 54461709

Intron Length:

5804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGGT

5'SS Class:

major

3'SS Sequence:

AATCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTAATCTGAAAA

Flanking Amino Acid:

KCLVLGTFLGGVYLLGKYGQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

64.2

41.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

77.3

0.61

0.9

70.5

35.2

Minor 5ss

-2.8

3.5

38.1

46.8

Minor BPS

-0

1.6

60.3

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035146

54440296 - 54461782

21487

ENSAPLT00000023413

54441763 - 54461782

20020

ENSAPLT00000008876

54433882 - 54461782

27901