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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54462191_54469232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54462191 - 54469232

Intron Length:

7042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTATGTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATGT

Flanking Amino Acid:

GRNEVNETKNPTRHAEMVAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.4

35.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.6

0.6

0.9

69.7

41.2

Minor 5ss

-2.4

3.2

35.6

41.4

Minor BPS

55.4

0.25

1.9

75.72

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026850

54461944 - 54496662

34719