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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54470038_54471560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54470038 - 54471560

Intron Length:

1523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

CTAATTTGAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTATTCTAATT

Flanking Amino Acid:

DMVDTGEPFECMSGYYAKEA

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

77.7

33.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

65.6

0.35

1.1

61.6

43.2

Minor 5ss

47.2

-0.3

2.9

64.7

Minor BPS

0.27

1.6

75.22

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026850

54461944 - 54496662

34719