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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54587447_54623647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54587447 - 54623647

Intron Length:

36201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CACTGCTGAAGA

Flanking Amino Acid:

SWKFLTFIDLVIQAVFFGIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.9

40.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

0.65

0.9

73.8

35.5

Minor 5ss

37.7

-1.4

3.3

48.2

42.1

Minor BPS

44.8

-0.3

2.1

52.81

45.3

Associated Gene:

Gene:

AIG1

Ensembl Gene ID:

ENSAPLG00000009304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009683

54503165 - 54623874

120710