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Intron Name: Anas_platyrhynchos_platyrhynchos_3_54762224_54762809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54762224 - 54762809

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GTGGCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ACCATTTTGACT

Flanking Amino Acid:

SVDDAETEEAENMEDMQQEA

Intron Amino Acid Position:

1950

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

69.9

0.45

65.4

45.5

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

55.3

0.25

1.3

64.76

40.3

Associated Gene:

Gene:

HIVEP2

Ensembl Gene ID:

ENSAPLG00000015149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015799

54746391 - 54773179

26789