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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55023664_55030018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55023664 - 55030018

Intron Length:

6355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTACCTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGGCCTTTTACC

Flanking Amino Acid:

LTVFGELSEENVQHRKYARW

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

78.9

0.65

0.8

77.2

31.2

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

56.7

0.19

1.6

64.83

40.7

Associated Gene:

Gene:

VTA1

Ensembl Gene ID:

ENSAPLG00000002391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002422

55009948 - 55048108

38161