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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55030095_55030749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55030095 - 55030749

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGCAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

DNEDRAGQFHKNMIKSFYTA

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.3

34.5

Major BPS

54.1

0.1

1.4

40.9

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

32.3

-2

3.4

39.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

VTA1

Ensembl Gene ID:

ENSAPLG00000002391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002422

55009948 - 55048108

38161