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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55034176_55047376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55034176 - 55047376

Intron Length:

13201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

TGTTTCCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

AGATACTTAATT

Flanking Amino Acid:

DKREPVVAYYCRLYAMQTGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

39.9

Major BPS

78.2

0.7

77.9

32.1

Major PPT

76.4

0.59

80.1

32.4

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

67.8

0.64

1.5

77.59

38.3

Associated Gene:

Gene:

VTA1

Ensembl Gene ID:

ENSAPLG00000002391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002422

55009948 - 55048108

38161