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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55277718_55284334_R

Intron Information:

Intron Rank:

137681

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55277718 - 55284334

Intron Length:

6617

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

TAA|GTACAAAGG

5'SS Class:

major

3'SS Sequence:

ATCTGGCCAGGGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TCCTTGGTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.1

53.6

43.6

Major BPS

0.47

1.2

61.1

45.5

Major PPT

28.6

-1.2

3.3

40.5

38.8

Minor 5ss

32.9

-2

3.2

39.5

40.4

Minor BPS

40.8

-0.6

2.6

62.15

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028174

55277305 - 55285159

7855