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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55774700_55823132_R

Intron Information:

Intron Rank:

149093

Intron Class:

major

Intron Phase:

Intron Coordinates:

55774700 - 55823132

Intron Length:

48433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATATGCACAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.83

0.7

81.8

28.4

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

47.1

-0.2

2.2

64.39

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022845

55774452 - 55823910

49459