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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55841990_55916145_F

Intron Information:

Intron Rank:

147115

Intron Class:

major

Intron Phase:

Intron Coordinates:

55841990 - 55916145

Intron Length:

74156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCATAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

52.8

0.07

1.1

36.2

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044868

55827859 - 55917145

89287