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Intron Name: Anas_platyrhynchos_platyrhynchos_3_55936898_55937432_F

Intron Information:

Intron Rank:

124019

Intron Class:

major

Intron Phase:

Intron Coordinates:

55936898 - 55937432

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAATG

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

73.3

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.6

0.62

77.1

41.6

Minor 5ss

31.8

-2.1

37.5

41.1

Minor BPS

67.4

0.41

1.4

69.97

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039585

55936056 - 55943836

7781